Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKKIILSIATIAATASLAVSVQASEKVELKVATDSDTAPFTYQK-DGKFKGYDVDVVKAVFKGSKYKVTFKTVPFDTISTGIDAGKFDLSANDFSYNKERAEKYLFSDPISRSNYAVVGKKGSHYKSLSDLSGKSTEVLSGVNYAQVLENWNKNHPNKKPIKIKYVSGTTGVTSRLKNIESGKIDFILYDAISSDYIVK---DQSLNLSVSPLKGKIGNNKDGLEYLLLPKDKKGKTLQKFINKRIKVLKENGTLARLSKQYFGGDYVSNIDK
4LA9 Chain:A ((29-250))-----------------------AETTV--KIASDSSYAPFEFQNGQKKWVGIDVDIMQEVAKINDWKLEMSYPGFDAALQNLKAGQVDGIIAGMTITDERKETFDFSNPYYTSALTIATTKDSKLSDYSDLKGKAV----GAKNGTAAQTWLQENQKKYGYTIKTYSDGVHMFAAL---SSGNIAGAMDEVPVISYAMKQGQDLAMNFPSISLPGGYG---------FAVMKGKNSTLVDGFNKALAEMKSNGDYDKILKKYGITA-------


General information:
TITO was launched using:
RESULT:

Template: 4LA9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46238 for 1751 contacts (-26.4/contact) +
2D Compatibility (PS) -23359 + (NN) -6777 + (LL) 3964
1D Compatibility (HY) -11200 + (ID) 3200
Total energy: -86810.0 ( -49.58 by residue)
QMean score : 0.405

(partial model without unconserved sides chains):
PDB file : Tito_4LA9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LA9-query.scw
PDB file : Tito_Scwrl_4LA9.pdb: