Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYKTIKSDGIVEEEIKKSRFICHLKRVESEEEGRNYITQIKKAHYKANHSCSAMVIGEKGDIKRSSDDGEPSGTAGIPMLTVLEKQGLTNVVAVVTRYFGGIKLGAGGLIRAYSGSVANTIKEIGVVEVKEQIGIRIQLTYPQYQTFDNFLKEHHLQEFETEFL-E-AVTCKIYVDPKEFEHTITNLTEFYQGKALLTEEGSQIVEIPFKAETDK |
1T95 Chain:A ((168-237)) | -----------------------------------------------------------------------------------------------------------------------------------EEMEIAIKIPPEHTGRAISALYNF-GGVTREEWQRDGSWICVMRIPSGMYGDLMDLLGKVAKGEALTKVLRRIG----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T95.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11986 for 395 contacts (-30.3/contact) +
2D Compatibility (PS) -6346 + (NN) 2016 + (LL) 9048
1D Compatibility (HY) 3600 + (ID) 250
Total energy: -3918.0 ( -9.92 by residue)
QMean score : 0.098
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