Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKFFKLKEHGTTIRTEITAGLTTFFAM-SYILFVNPAILSQTGMPAQGVFLATIIGAVVATSVMAFYANLPYAQAPGMGLNAFFTYTVVFALGYTWQEALAMVFICGLISLIITLTKVRKMIIESIPTT-LKSAITAGIGTFLAYVGIKNAGFLKFSIDPGTYDVVGKGAAKGLATITANSSATPGLVSFDNPAILLSLIGLSITIFFIVKGIRGGIILSILTTTLLGILMGVVKLDAINW---------------EATNLSASFRDL-KQ--VFGV-ALGEKGLISLFSNPSRLPSVLMAILAFSLTDIFDTI--GTLIGTGEK-VGILATTGDNHESKSLDKALYSDLIGTTFGAICGTSNVTTYVESAAGIGAGGRTGLTALVVAGLFAISSFFSPLVSIVPSQATAPILVIVGIMMLSNLKDIKWDD-MSEAIPAFFTSLFMGFTYSITYGIAAGFLTYTLAKVIKGQA-KDIHVVLWILDILFILNFISLAIL |
| 3S6G Chain:A ((25-460)) | --------------APGVRQTIVQLLSHMRDGKEIREYLHRFSGIDQERFAVIKVGGAVIQDDLPGLASALAFLQTVGL------TPVVVHGGGPQLDAALEAADI---------PTERVDGLRVTRDEAMPIIRDTLTQANLALVDAIRDAGGRAAAVPRGVFEADIVD--------ADKLGRVGEPRHIHLDLVGSAARAGQAAILACLGETPDGTLVNINADVAVRALVHALQPYKVVFLTGTGGLLDEDGDILSSINLATDFGDLMQADWVNGGMRLKLEEIKRLLDDLPLSSSVSITRPSELARELFTHAGSGTLIRRGERMV-------ATDDKSSLDLGRLDNLVKAAFG-------------RPAVEGYWDRLRVDRAFVTESYR----AAAITTRLDGWVYLDKFAVLDDARGEGLGRTVWNRMVDYAPQLIWRSRTNNPVNGFYFEECDGAVRRDEWTVFWRGEMGPVEVADVVEKAFALPPTLEAP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S6G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -318919 for 3273 contacts (-97.4/contact) +
2D Compatibility (PS) -42843 + (NN) -1531 + (LL) 4992
1D Compatibility (HY) 400 + (ID) 3000
Total energy: -360901.0 ( -110.27 by residue)
QMean score : 0.143
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