Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIGRLIALGLVSLGALELYKNRKTIKDSYQNTKIETDSAKLKLERIKNDLAIISQEKEKIRLISQELNHKFQVFNKDIQPRLEEINQRMAKYQEKDE
1ZTM Chain:A ((126-160))
----------------------IEKLKEAIRDTNKAVQSVQSSIGNLIVAIKSVQDYVNKEIVPSIARLGCEAAGLQLGIALTQHYSELTNIFGDNIG
General information:
TITO was launched using:
RESULT:
Template:
1ZTM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6579 for 130 contacts (50.6/contact) +
2D Compatibility (PS) -3722 + (NN) -398 + (LL) 1952
1D Compatibility (HY) -1200 + (ID) 150
Total energy: 3061.0 ( 23.55 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_1ZTM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZTM-query.scw
PDB file :
Tito_Scwrl_1ZTM.pdb
: