Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------------------------------------------------MDNKKLLITGKILLAILYIIVLFAVCVLAAMAFLSLFGSKLLDVDFFTLFLSDGIFKGGLMLGIVFFLVVLDASI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 1T6E Chain:X ((1-381)) | LPVLAPVTKDPATSLYTIPFHDGASLVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPGCPAPSCKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLA------------NSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPHFTGCGGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T6E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40379 for 302 contacts (-133.7/contact) +
2D Compatibility (PS) -6097 + (NN) 4034 + (LL) 1964
1D Compatibility (HY) 2000 + (ID) 600
Total energy: -39078.0 ( -129.40 by residue)
QMean score : 0.231
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