Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKNKFLLVSIVFIIIFVVQPQNFQSLKNIFTQNDIASQLNISSSPEEKNDGLGTAYQTQNEDLKSKSFDGQHQVIVVNEKAQFTAEELSMRNGSWEKYDNLDFLNRVGVAEAMLGKELMPKEARQDISSVKPTGWKNKKITFNGKQDYLYNRSHLIGFQLSGE-NANVKNLFTGTRALNANFN-----DDKSSMVYYENEVANYIKKT-NHHVRYRVTPLFKNVELVARGVRIEAQSIEDE--TIS---------------FDVYIFNGQPGYDIDYLTGSSEKIMITK |
2XGR Chain:A ((57-250)) | -------------------------------------------------------------------------------------------TANYQLQLGELDNLNRATFSHIQLQDRHETKDVRTKI--------------------WVMNRGHLVGYQFCGLND-EPRNLVAMTAWLNTGAYSGANDSNPEGMLYYENRLDSWLALHPDFWLDYKVTPIYSGNEVVPRQIELQYVGIDSSGELLTIRLNSNKESIDENGVTTVILENSAPNINLDYLNGTATP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XGR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28042 for 1083 contacts (-25.9/contact) +
2D Compatibility (PS) -15688 + (NN) -25 + (LL) 8140
1D Compatibility (HY) -12000 + (ID) 2050
Total energy: -49665.0 ( -45.86 by residue)
QMean score : 0.310
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