Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKQNNRMTIYYKEENLKKYEALKSFFEADEHISSMTTSATFLFLVDICYQLFIESNSGQSYSERLKQ--FLNSKNSDVEELKNKVKLV-----SRQLDQLLYL-ELTNFHALTKGNDFDIQDLESVHSRFDPMQHELIARIDDIIKEDVARGQAMKHSH |
2OMZ Chain:A ((85-158)) | --------------------------------------------------RLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNN-QITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OMZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12752 for 359 contacts (35.5/contact) +
2D Compatibility (PS) -6516 + (NN) 1498 + (LL) 4508
1D Compatibility (HY) -4800 + (ID) 1300
Total energy: 6142.0 ( 17.11 by residue)
QMean score : 0.123
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