Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEFIANGRVASIPDDAVGRTANGHVSFKFEFVCDSSQQDQ-EGK--GLPAFFHVQVYGKQAEIMAQSLSKGLPILIKGEIIQRPYTNQQGQRRTFQYISPSQHDGITFLESKEATKKRKQGRFTSQAVTSPTLAYSEPVDADEPF
3TQY Chain:A ((8-113))
VNKVILIGNLGQDP--EVRYTPNGNAVANVTLATSTTWRDKQTGELQERTEWHRIAFFNRLAEIVGEYLRKGSKIYIEGSLRTRKWQDKNGVDRYTTEIIANEM---HMLD-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3TQY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44757 for 600 contacts (-74.6/contact) +
2D Compatibility (PS) -11042 + (NN) -1351 + (LL) 1944
1D Compatibility (HY) -3200 + (ID) 1150
Total energy: -59556.0 ( -99.26 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_3TQY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQY-query.scw
PDB file :
Tito_Scwrl_3TQY.pdb
: