Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRREVIVFLENQGAIVQGYVSS-QTEILLAGHKQLDLFEPDKRSRKYEAALSRIATGQAITILSEEAFFNLVKTSQI
2EBW Chain:A ((63-119))
-SAEELRKLMMLHGGQYHVYYSRSKTTHIIATNLPN---------AKIKEL-------KGEKVIRPEWIVESIKAGRL
General information:
TITO was launched using:
RESULT:
Template:
2EBW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20372 for 287 contacts (-71.0/contact) +
2D Compatibility (PS) -6172 + (NN) -2520 + (LL) 940
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -31374.0 ( -109.32 by residue)
QMean score : 0.220
(partial model without unconserved sides chains):
PDB file :
Tito_2EBW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EBW-query.scw
PDB file :
Tito_Scwrl_2EBW.pdb
: