Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEWIKENMIYVIAIGLLLIFSGVAVYRSVTQNKSQSPQVEHMKPLDSSSSSMDESE---TTDEKNYRTAK---LKLEHPYSESSEEQKQEVRKAFDEAIKAIQQANHLTEVKGTLDNHLSMSQDGMIQTLAMAILVNQYSYQSSKLEVTPSENEDVVQFLIVLTKQGEDSCYFVGNFNTTVSQIQLKAYVGGNIGGTFG |
3QHQ Chain:A ((14-107)) | -----------VLSNATILTIEDVSVYSSLVKHFYQYDVDEHLKLFDDKQKSLKATELMLVTDILGYDVNSAPILKLIHGDLENQFNEKPEVKSMVEKLAATITELIAFECLENELDLEYDEITILELIKALGVKIETQSDTIFEKCFEIIQVYHYLTKKNLLVFVNSGAYLTKDEVIKLCEYINLMQKSVLFLEPRRLY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QHQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12958 for 370 contacts (35.0/contact) +
2D Compatibility (PS) -9324 + (NN) -1682 + (LL) 1328
1D Compatibility (HY) -4800 + (ID) 1250
Total energy: -2770.0 ( -7.49 by residue)
QMean score : 0.285
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