Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIANQTIVDIVTQVVTPAIQAPFELVDVEYEKMGGDYVLSILIDKPGGITVEDTAQLTDVVSPLLDTIQPDPFPEQYMLEVSSPGLERPLKTAEALSNAV--GSYINVSLYKSIDKVKIFEGDLLSFDGETLTIDYMDKTRHKTVDIPYQTVAKARLAVKL
3HFO Chain:A ((5-67))
--------------------------------------------------------------------------------------DSGLPSVRQVQLLIKDQTPVEIKLLT----GDSLFGTIRWQDTDGLGLVDDS---ERSTIVRLAAIAYITPR---
General information:
TITO was launched using:
RESULT:
Template:
3HFO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35601 for 362 contacts (-98.3/contact) +
2D Compatibility (PS) -6539 + (NN) -2042 + (LL) 6840
1D Compatibility (HY) -2400 + (ID) 300
Total energy: -40042.0 ( -110.61 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_3HFO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HFO-query.scw
PDB file :
Tito_Scwrl_3HFO.pdb
: