Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYLEQLKEVNPLTICITNNVVKNFTANGLLALGASPAMSECIEDLEDLLKVANALLINIGTLTKESWQLYQEAIKIANKNQVPVVLDPVAAGASRFRLEVSLDLLKNYSISLLRGNGSEIAALVG-EKQASKGADGGKVADLESIAVKANQVFDVPVVVTGETDAIAVRGEVRLLQNGSPLMPLVTGTGCLLGAVLAAFIGSSDRSDDLACLTEAMTVYNVSGEIAEKVAKGKGVGSFQVAFLDALSQMKSEMIMDK
1ESQ Chain:B ((22-274))
--LTAVRRHSPLVHSITNNVVTNFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVGVT-------------DIIRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGHKLLTKVTGAGSLLTSVVGAFCAVEE--NPLFAAIAAISSYGVAAQLAAQQTADKGPGSFQIELLNKLSTVTEQDVQEW
General information:
TITO was launched using:
RESULT:
Template:
1ESQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -200064 for 2205 contacts (-90.7/contact) +
2D Compatibility (PS) -25804 + (NN) -8181 + (LL) 688
1D Compatibility (HY) -13600 + (ID) 5100
Total energy: -252061.0 ( -114.31 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_1ESQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ESQ-query.scw
PDB file :
Tito_Scwrl_1ESQ.pdb
: