Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKIILKSSVLGLVAGTSIMFSSAFADQVGVQVIGVNDFHGALDNTGTANMPDGKVTNAGTAAQLDAYIDDAQKDFKQTNPNGESIRVQAGDMVGASPANSGLLQDEPTVKTFNAMNVEYGTLGNHEFDEGLAEYNRIVTGKAPAPDSNINNITKSYPHEAAKQEIVVANVIDKVNKQIPYNWKPYAIKNIPVNNKSVNVGFIGIVTKDIPNLVLRKNYEQYEF---LDEAETIVKYAKELQAKNVKAIVVLAHVPATSKDDIAEGEAAEMMKKVNQLFPENSVDIVFAGHNHQ-------------YTNGLVGK------TRIVQALSQGK--AYADVR---GVLDTDTQDFIETPSAKVVAVAPGKKTGSADIQAIVDQANTIV---------KQVTEAKIGTAEVSGMITRSVDQDNVSPV----GSLITEAQLAIARKSWPDIDFAMTNNGGIRADLLIKPDGTITWGAAQAVQPFGNILQVVEITGRDLYKALN--EQYDQKQNFFLQIAGLRYTYTDNKEGGEETPFKVVKAYKSNGEEINPDAKYKLVINDFLFGGGDGFASFRNAKLLGAINP---DTEVFMAYITDLEKAGKKVSVPNNKPKIYVTMKMVNETITQNDGTHSIIKKLYLDRQGNIVAQEIVSDTLNQTKSKSTKINPVTTIHKKQLHQFTAINPMRNYGKPSNSTTVKSKQLPKTNSEYGQSFLMSVFGVGLIGIALNTKKKHMK |
| 1OIE Chain:A ((43-505)) | -----------------------------------------------------------------------------KEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYDAMAIGNHEFDNPLTVLRQ--------------------QEKWAKFPLLSANIYQKSTGERLF--KPWAL----FKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQ---ELQ-QTEKPDIIIAATHMGHYDNGEHGCNAPGDVEMARALPAGSLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKV------SERVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIG--ETNGRL--EGDRDKVRFVQTNMGRLILAAQMDRT-----GADFAVMSGGGIRDSI---EAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAVAQMKPDSGAYPQFANVSFVAKDGK----------LNDLKIKGEPVDPAKTYRMATLNFNATGGDGYPRLDNK--CGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQE------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OIE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134841 for 3291 contacts (-41.0/contact) +
2D Compatibility (PS) -44105 + (NN) -17656 + (LL) 14008
1D Compatibility (HY) -20000 + (ID) 6000
Total energy: -208594.0 ( -63.38 by residue)
QMean score : 0.314
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