Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLLYIFEKNIILRKILITFSLIIIFLLGRYVPIPGVLISAYKGQDNNFATLYSTVTGGNLSQVGVFSLGIGPMMTTMILLRLFTIGKYSS--G-------VSQKVQQFRQNVVMLVIAIIQGLAIAISFQYHNG---------FSLTKLLLATMILVTGAYIISWIGNLNAEYGFG-GMTILVVVGMLVGQFNNIPLIFELFQDGYQLAI-ILFLLWTLVAMY-LMITFERSEYRIPVMRTSIH----NRLVDDAYMPIKVNASGGMAFMYVYTLLMFPQYIIILLRSIFPTNPDITSYNDYFSLSSIQGVVIYMILMLVLSVAFTFVNIDPTKISEAMRESGDFIPNYRPGKETQSYLSKICYLFGTFSGFFMAFLGGVPLLFALGNDDLRTVSSMTGIFMMITGMSFMILDEFQVIRIRKQYTSVFENEEN |
| 3DL8 Chain:G ((8-428)) | -----LFELKELRQKFIFTLLMFVIYRLGSHIPIPGIN-----------FALYDIFSGGNLGRLTVFALGVMPYISASIMMQLLT-VAIPSLQRLAKEEGDYGRYKINEYTKYLTLFVATVQSLGIAFWIRGQVSPKGIPVVENPGISFILITVLTLVAGTMFLVWIADRITEKGIGNGASLIIFAGIVANFPNAVIQFYEKVKTGDIGPLTLLLIIALIIAIIVGIVYVQEAERRIPIQYPGRQVGRQLYAGRKTYLPIKINPAGVIPIIFAQALLLIPSTLLNFVQNPF--IKVI---ADMFQPGAIFYNFLYVTFIVFFTYFYTAVLINPVELAENLHKAGAFIPGVRPGQDTVKYLERIINRLIFFGALFLSVIALIPILISVWFNI--PFYFGGTTALIVVGVALDTFRQIETYLIQKKYKSYVR---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3DL8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -225130 for 2620 contacts (-85.9/contact) +
2D Compatibility (PS) -39038 + (NN) -5376 + (LL) 1592
1D Compatibility (HY) -41200 + (ID) 1550
Total energy: -310702.0 ( -118.59 by residue)
QMean score : 0.072
|
|
|