Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLAVLGTG-MIVKEVLPVLQKIEGIDLVAILSTVRSLETAKDLAKEYNMSLAT----SEYKAVLDNEEIDTVYIGLPNHLHFDYAKEALLAGKHVICEKPFTLEASQLEELVSIANTRQLILLEAITNQYLP----NFDLVKEHLSNLGDIKIVECNYSQYSSRYDAFK----RGEIAPAFNPEMGGGALRDLNIYNLHLVIGLFG-EPITAQYL----PNIERGIDTSGVLVLDYGHFKTVCI--GA--KDCSAEVKSTIQGDKGSIAILGPTNTMPKISLTMNGQESHVYQLNGDRHRMHDEFVIFEGIISNLDFKRAAQALEHSRTVMKVLDMVTK |
| 1H6D Chain:A ((87-337)) | ---AIVGLGKYALNQILPGFAGCQHSRIEALVSG--NAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIREN--QLGKLGMVTTDNSDVMDQNDPAQQWRLRRELA-------GGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPNDERFVEVEDRIIWQM-RFRSGALSHGASSYSTTTTSRFSVQGDKAVLLMDPATGYYQNLISVQTPGHANQSMMPQFIMPANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126147 for 1618 contacts (-78.0/contact) +
2D Compatibility (PS) -24474 + (NN) -9765 + (LL) 944
1D Compatibility (HY) -13200 + (ID) 3650
Total energy: -176292.0 ( -108.96 by residue)
QMean score : 0.417
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