Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPNVKDITRESWILSTFPEWGTWLNEEIEEEVVADGNFAMWWLGN-----------CGVWIKTPGGANVVMDLWSNRGKSTKKVKDMVRGHQMANMAGVRKLQPNLRAQPMVIDPFAINELDYYLVSHFHSDHIDINTAAAIINNP--------NLDHVKFVGPYECGEIWKKW-GVPEERIIVIKPGESFEFKDIKVTAVESFDRTCLVTLPVDGAEEHDGELAGLAVTDEEMARKAVNYIFETPGGTIYHGADSHFSNYFAKHGKDYKIDVAINNYGDNP---VGIQDKMTSIDLLRMAENLRAKVIIPVHYDIWSNFMASTDEILQLWKMRKERLQYDFHPFIWEVGGKYTYPQDKDRIEYHHPRGFDDCFEQESNIQFKALL |
1ZKP Chain:A ((20-267)) | --------------------------------FQSNAMKMTVVGFWGGFPEAGEATSGYLFEHD-GFRLLVDCGSGVLA---------------------------QLQK-YI---TPSDIDAVVLSHYHHDHV--ADIGVLQYARLITSATKGQLPELPIYGHTFDENGFHSLTHEPHTKGIPYNPEETLQIGPFSISFLKTVHP-----------------------------VTCFAMRITAGNDIVVYSADSSYIPEFIPFTK--DADLFICECNMYAHQEAAKAGHMNSTEVASIAKDANVKELLLTHLPHTGN----PADLVTEAKQIF-----SGHITLAHSGYVWNS------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147505 for 1962 contacts (-75.2/contact) +
2D Compatibility (PS) -24497 + (NN) -6506 + (LL) 9032
1D Compatibility (HY) -9600 + (ID) 1800
Total energy: -180876.0 ( -92.19 by residue)
QMean score : 0.495
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