Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKCLTLNTHSWMEVNALKKLFDLAEHIFR-EKYDIICLQEVNQSISSPLAKSSPNYHPIEGTPALHQDNFALQLVHYLNL-QGL----HYHWTWAYNHIGYSKYHEGVAILSLKPL-KPEDILVSAVDDETDYHTRRALVAETTLNDKVVTVVSLHLSWF-EKGFAEEWKRLETTLLE----VETPLLLMGDFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGNKKALKVDHIFTSEDLSISSS----Q----VVFEGGEAPVVSDHYGLEITMDF |
| 1SR4 Chain:B ((4-260)) | DFKVATWNLQGSSAVNESKWNINVRQLLSGEQGADILMVQEAGSLPSSAVRTS-------------RVIQHGGTPIEEYTWNLGTRSRPNMVYIYYSR-LDVGANRVNLAIVSRRQADEAFIV--HSDS--SVLQSRPAVGIRI----GTDVFFTVHALATGGSDAVSLIRNIFTTFNSPPERRVYSWMVVGDFNRAPANLEVALRQEPA--VSENTIII-----APTEP-------THRSGNILDYAILHDAHLPRREQARERIGASLMLNQLRSQITSDHFPVSFVRDR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SR4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73172 for 1934 contacts (-37.8/contact) +
2D Compatibility (PS) -24320 + (NN) 438 + (LL) 1348
1D Compatibility (HY) -4000 + (ID) 1750
Total energy: -101456.0 ( -52.46 by residue)
QMean score : 0.333
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