Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPTERKEDLHQQLKEIEKWEKDQQKVWFWEKLSRLPFQLLDKLTPEFIQKKIGKLLDEVGSFVQTGGQYLTSEKQIIRMFQKKLPEEIFESLEDIRKAPLPVMDEIAEGMGKNRTNAATVQGATTGVGGVFTLAADIPAVLGLSLKTLQDIAVAYGYDPKEKKERVFIVKCLQLTSADVVGKRSILQELKHYDQDRTYKNVASQIQGWREVVLGYRDTFGWKKLFQIVPVAGMVFGAAANRSTLNDITETGMMLYKKRRILERLKETEREME
5CW9 Chain:A ((21-65))--------------------------------------------------------------------------EMIRQARKFAGTVTVTLIIRFRGDDLEALEKALKEMIRQARKFAG---------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5CW9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 32 -4633 -144.78 -102.96
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -144.78
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.294

(partial model without unconserved sides chains):
PDB file : Tito_5CW9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CW9-query.scw
PDB file : Tito_Scwrl_5CW9.pdb: