Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMDIKKQDTRRFKEIKPKIMYYGTSTFLLTTLNEDGTTNISPMSSSWALG---HYIILGVGLGGKAIDNLERHKECVINLPGPDLWENVERISSYSGKKSIPPLKKQIGFTYKKEKYEAAGLTPLQSKTVSPTRIKECPIQIEAEVKHIRLPEYESSFAIVETQALHFHAEESIILDENHINPSKWSPLIYNFRHYFGLGREVGKTFRSET
1YOA Chain:A ((4-159))-----------EAKKKVLRSFTYGLYVLTAKD-GDEVAAGTVNWVTQASFQPPLVAVGLKRDSHLHALVERTGKLALMTLAHDQKAIAQDFFKPTVRE--------------GDRLNG--HPFEPSPTFGLPLLTELPYWLEAEVRHLYPG---GDHSLVVAEVVEAGVRRE------------EKPLVMWDTGWFYGG-----------


General information:
TITO was launched using:
RESULT:

Template: 1YOA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 807 -77967 -96.61 -509.58
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -96.61
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.283

(partial model without unconserved sides chains):
PDB file : Tito_1YOA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YOA-query.scw
PDB file : Tito_Scwrl_1YOA.pdb: