Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQRVSYYEIAPEGMKIMMDMEKY-TK-QSSINRTTRELIKIRVSQMNGCAFCIDMHTSDARKMGETEQRIYCLHAWNECDFYSPEEKAALELSEHITLIPSKRVPDELYHRVRE-HYDEEQYVDLVLIINQINSWNRISIAMGNRAASK
3C1L Chain:A ((35-181))-PNVLKAYAFDDKKLRAFTDIYNDLMLGESGLSKLDREMIAVAVSSINHCYYCLTAHGAAVRQLSGDPALGEMLVMNFRAADLSPRQTAMLEFAVKLTEEP-AKIVEADRAALRKAGFSDRDIWDIASTAAFFNMSNRVAAAIDMRPND-


General information:
TITO was launched using:
RESULT:

Template: 3C1L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 580 -68926 -118.84 -478.65
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -118.84
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.306

(partial model without unconserved sides chains):
PDB file : Tito_3C1L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C1L-query.scw
PDB file : Tito_Scwrl_3C1L.pdb: