Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKEFFSIGEVSKLFNVKISALRYYDEIGLLKPEYKDEQTNYRYYSTQQFERLDTIKYLRALGLPINKLLDF--YNSQNTNTLLH---LLKSQQVEIDRKKKELERIERKISRRITHIEDAVNMPLHQISKIKLPAMRVAYLQHEYVLGHDIEHSLAELRTHLNVNEDIFIGKIGLSISAANVKAKQFDKYSSIFMILEDENEKTSSEIIFPSREYLQIRFKGSHPEAEPYYKKLLAYMKEHHYEVAGDSIEITLIDYGITNNLDNYVTEILLPIK
3GPV Chain:A ((21-133))---YYTIGQVAKMQHLTISQIRYYDKQGLF-PFLQRNEKGDRIFNEEALKYLEMILCLKNTGMPIQKIKQFIDWSMEGDSTILHRLKLMKQQEANVLQLIQDTEKNLKKIQQKIAKY--------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GPV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 280 -51422 -183.65 -476.13
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -183.65
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.701

(partial model without unconserved sides chains):
PDB file : Tito_3GPV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GPV-query.scw
PDB file : Tito_Scwrl_3GPV.pdb: