Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQKGRGLEILINEKQDGQWLFSVLKTALKASKPVIQDWMSHQQIKVNHESVLNNMIVKKGDRVFIDLQESEASSVIPEYGELDILFEDNHMLIINKPAGIATHPNEDGQTGTLANLIAYHYQINGETCKVRHVHRLDQDTSGAIVFAKHRLAHAILDQQLEKKTLKRTYTAIAEGKLRTKKGTINSPIGRDRSHPTRRRVSPGGQTAVTHFKVMASNAKERLSLVELELETGRTHQIRVHLASLGHPLTGDSLYGGGSKLLNRQALHANKVQAVHPITDELIVAEAPFPADMKNLCRTYFS
3DH3 Chain:A ((4-206))---------------DSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLI-----E------PREAEDLVLIALNKPVGIVSTTEDGE-RDNIVDFVNH---S----KRVFPIGRLDKDSQGLIFLTNHGDLVNKILRAG--NDHEKEYLVTVDKPITEE--FIRG-MS---A-----GVPI--LGTVTKKCKVKK---EAPFVFRITLVQGLNRQIRRMCEHFGYEVKKLERT-----------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3DH3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 891 -78223 -87.79 -385.33
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -87.79
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.250

(partial model without unconserved sides chains):
PDB file : Tito_3DH3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DH3-query.scw
PDB file : Tito_Scwrl_3DH3.pdb: