Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNILRAMVILLIICGTYVLFIQYGSVPEKKSNDSEPQVSNEEAQSGKRIHMPTSGLLSFMGKHADEVTKKLGEPERIDPSAYDYDWWVYNQGKDQYIQIGVLNNKVVTLFASGNDINAKPFKIGESTGEVFKTTQVAPFVNVEYKGNSYRFEFSEEDINTRPTVKVGKMYVQLYMDKFEGKLSSIRAFDAQTFVKQRPYEVVYRGELIKPKAVSDEKWKKIQTTSEKQILDLTNVIRVKHG-----LAKLEWDQPTAEVAFGHSEDMKENNYFSHVSKKYGSLKDRLEEGHVDFQQAGENIAYNY--VDGPAAVEGWLN----------------SEGHRKALLNSDYTHLGVGVDRKYYTQNFIKRW
1XTA Chain:A ((10-132))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWANTCS----LNHSPDNL-----R----VLEGIQCGESIYMSSNARTWTEIIHLWHDEYKNFVYGVGASPPGSVTGHYTQIVWYQTYRAGCAVS------------


General information:
TITO was launched using:
RESULT:

Template: 1XTA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 332 -24941 -75.12 -249.41
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -75.12
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.259

(partial model without unconserved sides chains):
PDB file : Tito_1XTA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1XTA-query.scw
PDB file : Tito_Scwrl_1XTA.pdb: