Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKKTTGHTTIKDVAECAGVSKSTVSRYINGKIDAISPEKVKNIKKAIAELNYRPSKMAQGLKIKKSKLIGFVVADITNPFSVAAFRGVEEVCDQYGYSIMVCNTDNSPEKEREMLLKLEAHSVEGLILNATGENKDVLRAFAE-QQIPTILIDRKLPDLKLDTVTTDNRWITKEILQK-VYSKGYTDVALFTEPISSISPRAERAAVYQEMASVQNVNGLVRLHE-IDVKDKEQLKAELRSFHK--EMPEQKKAILALNGLIMLKIISCMEELGLRIPQDIGIAGFDDTEWYKLIGPGITTIAQPSHDMGRTAMERVLKRIEGDKGAPQTIELEAKVIMRKSL
1WET Chain:A ((2-330))---------TIKDVAKRANVSTTTVSHVIN-KTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEE-----AMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSV


General information:
TITO was launched using:
RESULT:

Template: 1WET.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1729 -41406 -23.95 -127.80
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -23.95
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.553

(partial model without unconserved sides chains):
PDB file : Tito_1WET.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1WET-query.scw
PDB file : Tito_Scwrl_1WET.pdb: