Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIQDMILTLQKHWSSQGCVLMQAYDVEKGAGTMSPYTFLRSIGPEPWKVAYVEPSRRPADGRYGENP---NRLYQHHQFQVIIKPSP---------DNIQELYLDSLRALGIDPLEHDIRFVEDNWENPSLGCAG---LGWEVWLDG----MEITQFTY---FQ-QV--------GGLECKPVSVE-ITYGIERLASYIQDKENVFDLEWTSGFTVKDLFMMAEYEHSVYTFETSDVDMLFQLFSTYEKEAIKQMDNGLVHPAYDYVLKCSHTFNLLDAKGAISVTERTGYIARVRNLARKVAKTYYEEREKLGFPMLKGEGSSHE
1SES Chain:A ((243-391))--------------------------------------------ALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLELP-----YRLVEV--ATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQARRANLRYRDPEGRVRYAYTLNNTALATPRILAML-------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1SES.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 350 5168 14.76 44.17
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 14.76
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.442

(partial model without unconserved sides chains):
PDB file : Tito_1SES.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SES-query.scw
PDB file : Tito_Scwrl_1SES.pdb: