Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFMFEKPHGMRDTLPGLYETKKKVRRSLTDLI----DKWGYQFMETPTLEFYDTVGVQSAIEE--QQLFKLLDQDGKTLVLRPDMTGPIARVAASKLLKHGHPLRVGYAANVFRAQEREGGRPAEFEQVGVELIGDGTTSADAEVIALVVGALKNAGLAS------------FKIAIGHAGIADALFVEVLGNVERADVLRRFLYEKNYVGYREHVKSLPLSSIDKSRLLELLELRGGIEVCGRAEEIVDSAQGKSVVDELKALWDILEDYGCTENVRLDLNMVSHMSYYTGILFEVYAENVGF-VIGSGGRYNKLLGHFDSPA--PATGFGLRIDRLIEALHMK----DEPCEIDAVI--FSKEQRAQAIAYANEERMKGNKVVLQDLSGIENIDQMTKSFANVTYFIGARKEEQNG
4YRN Chain:A ((26-401))MVETEPVQGCRDFPP----EAMRCRRHLFDVFHATAKTFGFEEYDAPVLE-SEELYIRKAGEEITEQMFNFITKGGHRVALRPEMTPSLARLLLGKGRSLLLPAKWYSIPQCWRYEAITR--RREHYQWNMDIVGVKSVSAEVELVCAACWAMRSLGLSSKDVGIKVNSRKVLQTVVEQAGVTSDKFAPVCVIVDKME--PREEVEAQLA-----VLGLEPTVVDA--ITTTLSLKSIDEIAQRVGE------EHEAVKELRQFFEQVEAYGYGDWVLFDASVVRGLAYYTGIVFEGFDREGKFRALCGGGRYDNLLTTYGSPTPIPCAGFGFGDCVIVELLQEKRLLPDIPHVVDDVVIPFDESMRPHALAVLRRLRDAGR------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4YRN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1660 -3842 -2.31 -11.54
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -2.31
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.351

(partial model without unconserved sides chains):
PDB file : Tito_4YRN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YRN-query.scw
PDB file : Tito_Scwrl_4YRN.pdb: