Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPFGFTPKARHNRGVALRSTYRLDGWVMGPVDKEGWGLSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQQFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGLFKPTSPPVLPPMFNQNTAIIMGGTGSPIPTP----------SYVNAITTLFIDPVVS--NPVVKALVTPEELY-PITGVKSLPFQTSVQLGLQILDGAIWEQI--NAGNHVTVFGYSQSAVIASLEMQHLISLGPNAPSPSQLN-FILIGNEMNPNGGILARIP-----G-----LNVTTL---GLPFYGATPDN----PYPTTTYTLEYDGFADFPRYPLN---VLSDINAVF-GILTVHTTYADLTPAQIASATQLPTQGTTSNTYYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADALVAGTQQGVNDFMVELPAALNTLPQTPMPAFPPYVPTLLPPPPPPQPATLINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTLFVNQLAAGNLRAAIELPLAATIGLAALGGMIEFIAIVVTLADITQQLQSFSI |
| 3AJA Chain:A ((72-306)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------DCPDVMMVSIPGTWESSPTDDPFNPTQFPLSLMSNISKP-LAEQFGPDRLQVYTTPYTAQFHNPFAADKQMSYNDSRAEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGR-GPVDEDLVLGVTLIADGRRQMGVGQDVGPNPAGQGAEITLHEVPALSALGLTMTGPRPGGFGALDNRTNQICGSGDLICSAPEQAFSVFNLPKTLETLSG---PVHALYNTP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3AJA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -102470 for 1529 contacts (-67.0/contact) +
2D Compatibility (PS) -21532 + (NN) -18995 + (LL) 25808
1D Compatibility (HY) -400 + (ID) 1800
Total energy: -119389.0 ( -78.08 by residue)
QMean score : 0.337
|
|
|