Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDDHPYHVAITATAARDLQRLP---EKIAAACVEFVFGPLLNNPHRLG---KPLRNDLEGLHSARRG-DYRVVYAIDDGHHRVEIIHIARRSASYRMNPCRPR
2A6S Chain:A ((1-83))
------MKLIWSEESWDDYLYWQETDKRIVKKINELIK-DTRRTPFEGKGKPEPLKHNLSGFWSRRITEEHRLVYAVTDD--SLLIAACRYH------------
General information:
TITO was launched using:
RESULT:
Template:
2A6S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53548 for 490 contacts (-109.3/contact) +
2D Compatibility (PS) -8602 + (NN) -3860 + (LL) 232
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -71378.0 ( -145.67 by residue)
QMean score : 0.634
(partial model without unconserved sides chains):
PDB file :
Tito_2A6S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A6S-query.scw
PDB file :
Tito_Scwrl_2A6S.pdb
: