Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAALVREVVGDVLRGARMSQGRTLREVSDSARVSLGYLSEIERGRKEPSSELLSAICTALQLPLSVVLIDAGERMARQERLARATPAGRATGATIDASTKVVIAPVVSLAVA
1Y9Q Chain:A ((8-71))
----FKSQIANQLKNLRKSRGLSLDATAQLTGVSKAMLGQIERGESSPTIATLWKIASGLEASFSAFF--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Y9Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33609 for 435 contacts (-77.3/contact) +
2D Compatibility (PS) -6457 + (NN) 1613 + (LL) 4484
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -36819.0 ( -84.64 by residue)
QMean score : 0.639
(partial model without unconserved sides chains):
PDB file :
Tito_1Y9Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y9Q-query.scw
PDB file :
Tito_Scwrl_1Y9Q.pdb
: