Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKSLPGVADLRLGANHPRMWTRRVQGTVVNVGVKVLPWIPTPAKRILSAGRSVIIDGNTLDPTLQLMLSTSRIFGVDGLAVDDDIVASRAHMRAICEAMPGPQIHVDVTDLSIP-GPAGEIPARHYRPSGG-GATPLLVFYHGGGWTLGDLDTHDALCRLTCRDADIQVLSIDYRLAPEHPAPAAVEDAYAAFVWAHEHASDEFGALPGRVAVGGDSAGGNLSAVVCQLARDKARYEGGPTPVLQWLLYPRTDFTAQTRSMGLFGNGFLLTKRDIDWFHTQYLRDSDVDPADPRLSPLLA--ESLSGLAPALIAVAGFDPLRDEGESYAKALRAAGTAVDL-RYLGSLTHGFLNLFQLGGGSAAGTNELISALRAHLSRV |
| 4V2I Chain:A ((48-299)) | ----------------------------------------------------------------------------------------------------------VDITDTTFAVGPTGATKVRIIRPQGNTDRLPVIVYFHGAGWVMGDTGTHDRLVRELSVRANAALVFVDYERSPEARYPVAIEQDYAVTKYVAEH-SEQLNVDPTRLAIAGDSVGGNMTAVVSLLAQER----GGPDITAQVLFYPVTDADFDNGSYTEFANGPWLTKPAMDWFWNQYLPEG-IDRTDPKITPIHATSEQLSGQAPALVITAENDVLRDEGEAYARKLSQAGVDVTVTRYNGTI-HDFVMLNVLADTPAA---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V2I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136403 for 2194 contacts (-62.2/contact) +
2D Compatibility (PS) -27213 + (NN) -21772 + (LL) 8648
1D Compatibility (HY) -14000 + (ID) 5450
Total energy: -196190.0 ( -89.42 by residue)
QMean score : 0.554
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