Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLDLAVRLLIGDQDSA
4KWA Chain:A ((2-58))
-------------QSEARRRILETAWRLIARRGYHNVRIHDIASELGTSNATIHYHFPSKKDILLEALRR---------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4KWA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40827 for 377 contacts (-108.3/contact) +
2D Compatibility (PS) -6256 + (NN) -4038 + (LL) 11844
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -43827.0 ( -116.25 by residue)
QMean score : 0.671
(partial model without unconserved sides chains):
PDB file :
Tito_4KWA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KWA-query.scw
PDB file :
Tito_Scwrl_4KWA.pdb
: