Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQSATARQPEPEVAEAFRITPLEAPLGAEVRGLDARRPLAPEQVLALKQALREHHILVFRQQH-LDDEQYLRFATLFGSVFQPPADIPVLSSGGDGKVPDIVKVANTGDGELGNFALPAHIDHQWTPVPSSGSFLYALEVPSSGGETRFTNLARAYESLDEATRREIDGLRLINYNPFIRLREGGYGGGFATYRTPDIEPIQGSEHPLVRTHPESGRRVLFLSAHTEVEIPGYDPARGQALIGRLREHLARPELSYSHAWSVGDIVWWDNQAVLHARNAFPASERRRLKRISLAGSRPF |
3SWT Chain:A ((8-282)) | ----------------LITVKKLGSRIGAQVDGVSLGADLDAAAVDQIRAALLEHKVIFFRNQHHLDDQQQLQFAGLLGT------PI------------------------ANRW----HTDVTFAANYPAASILRAVTLPNYGGSTLWANTATAYAELPEPLKCLVENLWALHTNR----------------------PDFRTEHPVVRVHPETGERTL-LAGDFVRGFVGLDSQESSALFELLQRRITSPENTIRWNWESGDVAIWDNRATQHRAIDDYDDQHRLLHRVTLMGDVPV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SWT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104867 for 1797 contacts (-58.4/contact) +
2D Compatibility (PS) -24469 + (NN) -15959 + (LL) 2748
1D Compatibility (HY) -12800 + (ID) 3800
Total energy: -159147.0 ( -88.56 by residue)
QMean score : 0.490
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