Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTIDYNSYRTTTPYGKRVRFLVLHYTALDFAASVKALTTGAASAHYLIPAPHDPSYKAAGFKGQRIFNLVAEEDRAWHAGVSGWARRDNLNDTSIGIEIVNLARDDDGVFTFPDYERSQINALKQLAKNILQRYPDMTPKNVVGHSDIAVGRKSDPGPKLPWKELYEAGIGAWYDDATRDRYREGFERDGLPPRADLLEAFRLYGYALPATVDDAYFASLLRAFQMHFRPENYDGALDVETAAILYALNEKYPA
4BXJ Chain:B ((1-255))
MLTIDYNSYRTTTPYGKRVRFLVLHYTALDFAASVKALTTGAASAHYLIPAPHDPSYKAAGFKGQRIFNLVAEEDRAWHAGVSGWARRDNLNDTSIGIEIVNLARDDDGVFTFPDYERSQINALKQLAKNILQRYPDMTPKNVVGHSDIAVGRKSDPGPKLPWKELYEAGIGAWYDDATRDRYREGFERDGLPPRADLLEAFRLYGYALPATVDDAYFASLLRAFQMHFRPENYDGALDVETAAILYALNEKYPA
General information:
TITO was launched using:
RESULT:
Template:
4BXJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117759 for 2001 contacts (-58.9/contact) +
2D Compatibility (PS) -28484 + (NN) -24427 + (LL) 0
1D Compatibility (HY) -32800 + (ID) 12750
Total energy: -216220.0 ( -108.06 by residue)
QMean score : 0.633
(partial model without unconserved sides chains):
PDB file :
Tito_4BXJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BXJ-query.scw
PDB file :
Tito_Scwrl_4BXJ.pdb
: