Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEREYMEFDVVIVGAGPAGLSAACRLKQKAAEAGQEISVCVVEKGSEVGAHILSGAVFEPR--ALNELFPDWKELGAPLNTPVTGDDIYVLKSAESATKVPNFFVPKTMHNEGNYIISLGNLCRWLAQQAEGLGVEIYPGFAAQEALIDENGVVRGIVTGDLGVDREGNPKEGYYTPGMELRAKYTLFAEGCRGHIGKQLIKKYNL-DSEADAQHYGIGIKEIWDIDPSKHKPGLVVHTAGWPLNDENTGGSFLYHLE--NNQVFVGLIIDLSYSNPHLSPFDEFQRYKHHPVVKQYLEGGKRVAYGARAICKGGL-----NSLPKMVFPGGALIGCDLGTLNFAKIKGSHTAMKSGMLAADAIAEALAAGREGGDELSSYVDAFKASWLYDELFRSRNFGAAIHKFGAIGGGAFNFIDQNIFGGKIPVTLHDDKPDYACLKKASEAPKIDYPKPDGKLSFDKLSSVFLSNTNHEEDQPIHLKLADASIPIEKNLPLYDEPAQRYCPAGVYEVVANDDGSKRFQINAQNCVHCKTCDIKDPAQNITWVAPEGTGGPNYPNM |
| 4OPT Chain:A ((5-323)) | -----LKYDVLIIGGGFAGSSAAYQLSRR----GLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPK----GEELENKINGIKLY----------SPDMQTVWTVNGEG-FELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIF-EDGYVKGAVL----FNRRTNEELTVYS---KVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKE-DIEDHDY---LRIF-----FDQETSPGGYWWYFPKGKNKVNVGLGIQGGMGYPSI-----------HEYYKKYLDKYAPDVDKSKLLVKGGALVPTRRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OPT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125054 for 2625 contacts (-47.6/contact) +
2D Compatibility (PS) -32971 + (NN) -8043 + (LL) 10516
1D Compatibility (HY) -16800 + (ID) 4200
Total energy: -176552.0 ( -67.26 by residue)
QMean score : 0.394
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