Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTLKTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVECVMNNVTCTRIYEKVE
4AZM Chain:B ((5-138))
-ATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTLKTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVECVMNNVTCTRIYEKVE
General information:
TITO was launched using:
RESULT:
Template:
4AZM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18831 for 712 contacts (-26.4/contact) +
2D Compatibility (PS) -14781 + (NN) -2754 + (LL) 208
1D Compatibility (HY) -17600 + (ID) 6700
Total energy: -60458.0 ( -84.91 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_4AZM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AZM-query.scw
PDB file :
Tito_Scwrl_4AZM.pdb
: