Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKNTEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTHGTAVCTRTYEKEA
3P6C Chain:A ((8-138))
MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKNTEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVMKGVTSTRVYER--
General information:
TITO was launched using:
RESULT:
Template:
3P6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34002 for 933 contacts (-36.4/contact) +
2D Compatibility (PS) -14610 + (NN) -3861 + (LL) 248
1D Compatibility (HY) -12400 + (ID) 4250
Total energy: -68875.0 ( -73.82 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_3P6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P6C-query.scw
PDB file :
Tito_Scwrl_3P6C.pdb
: