Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLPSTIQTLTLFLTSGGVLLSLYVSASLSYLLYSDILLKFSPKITAPTMTLDCTNASNVQAVNRSATKEMTFLLPEPEWTYPRLSCQGSTFQKALLISPHRFGEARGNSAPLIIREPFIACGPKECKHFALTHYAAQPGGYYNGTREDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGREWTYIGVDGPDSNALIKIKYGEAYTDTYHSYANNILRTQESACNCIGGDCYLMITDGSASGISKCRFLKIREGRIIKEIFPTGRVEHTEECTCGFASNKTIECACRDNNYTAKRPFVKLNVETDTAEIRLMCTETYLDTPRPDDGSITGPCESN-GDKGRGGIKGGFVHQRMASKIGRWYSRTMSKTERMGMELYVKYDGDPWTDSDALDPSGVMVSIKEPGW---YSFGFEIKDKKCDVPCIGIEMVHDG--GKKTWHSAATAIYCLMGSGQLLWDTVTGVDMAL |
4KS3 Chain:A ((33-366)) | ---------------------------------------------------------------------------------------------------------------FVIREPFVSCSPIECRTFFLTQGSLLNDKHSNGTVKDRSPFRTLMSVKVGQSPNVYQARFEAVAWSATACHDGKKWMTVGVTGPDSKAVAVIHYGGVPTDVINSWAGDILRTQESSCTCIQGDCYWVMTDGPANRQAQYRIYKANQGRIIGQADISFNGGHIEECSC-YPNDGKVECVCRDNWTGTNRPVLVISPDL-SYRVGYLCAGIPSDTPRGEDAQFTGSCTSPMGNQGYGVKGFGF---RQGTDV--WMGRTISRTSRSGFEILRIKNGWTQTSKEQVRKQVVVDNLNWSGYSGSFTLPVELSGKDCLVPCFWVEMIRGKPEEKTIWTSSSSIVMC------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KS3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106292 for 2849 contacts (-37.3/contact) +
2D Compatibility (PS) -34078 + (NN) -6201 + (LL) 8568
1D Compatibility (HY) -23600 + (ID) 6300
Total energy: -167903.0 ( -58.93 by residue)
QMean score : 0.379
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