Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRRCVLL
2FJU Chain:A ((1-177))
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL--------------
General information:
TITO was launched using:
RESULT:
Template:
2FJU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140440 for 1464 contacts (-95.9/contact) +
2D Compatibility (PS) -19244 + (NN) -8116 + (LL) 688
1D Compatibility (HY) -24800 + (ID) 6400
Total energy: -198312.0 ( -135.46 by residue)
QMean score : 0.714
(partial model without unconserved sides chains):
PDB file :
Tito_2FJU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FJU-query.scw
PDB file :
Tito_Scwrl_2FJU.pdb
: