Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTISSAHPETEPKWWKEATFYQIYPASFKDSNDDGWGDMKGIASKLEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDLVINHCSSEHEWFKESRSSKTNPKRDWFFWRPPKGYDAEGKPIPPNNWKSYFGGSAWTFDEKTQEFYLRLFCSTQPDLNWENEDCRKAIYESAVGYWLDHGVDGFRIDVGSLYSKVVGLPDAPVVDKNSTWQSSDPYTLNGPRIHEFHQEMNQFIRNRVKDGREIMTVGEMQHASDETKRLYTSASRHELSELFNFSHTDVGTSPLFRYNLVPFELKDWKIALAELFRYINGTDCWSTIYLENHDQPRSITRFGDDSPKNRVISGKLLSVLLSALTGTLYVYQGQELGQINFKNWPVEKYEDVEIRNNYNAIKEEHGENSEEMKKFLEAIALISRDHARTPMQWSREEPNAGFSGPSAKPWFYLNDSFREGINVEDEIKDPNSVLNFWKEALKFRKAHKDITVYGYDFEFIDLDNKKLFSFTKKYNNKTLFAALNFSSDATDFKIPNDD--SSFKLEFGNYPKKEVDASSRTLKPWEGRIYISE |
2PWD Chain:A ((6-554)) | -------------WWKSAVFYQVYPRSFKDTNGDGIGDFKGLTEKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVDVVINHSSDQHEWFKSSRASKDNPYRDYYFWRDGKDGH------EPNNYPSFFGGSAWEKDPVTGQYYLHYFGRQQPDLNWDTPKLREELY-AMLRFWLDKGVSGMRFDTVATYSKTPGFPD---LTPEQMKNFAEAYT-QGPNLHRYLQEMHE----KVFDHYDAVTAGEIFGAPLNQVPLFIDSRRKELDMAFTFDLIRYDRA-LDRWHTIPRTLADFRQTIDKV-DAIAGEYGWNTFFLGNHDNPRAVSHFGDDRPQWREASAKALATVTLTQRGTPFIFQGDELGMTNYPFKTLQDFDDIEVKGFFQDYVETGKATAEEL---LTNVALTSRDNARTPFQWD-DSANAGFT--TGKPWLKVNPNYTE-INAAREIGDPKSVYSFYRNLISIR--HETPALSTGSYRDIDPSNADVYAYTRSQDGETYLVVVNFKAEPRSFTLPDGMHIAETLIESSSPAAPAAGAASLELQPWQSGIY--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2PWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -80293 for 4890 contacts (-16.4/contact) +
2D Compatibility (PS) -58900 + (NN) -34236 + (LL) 2032
1D Compatibility (HY) -38000 + (ID) 10850
Total energy: -220247.0 ( -45.04 by residue)
QMean score : 0.420
|
|
|