Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFSALLLEVIWILAADGGQHWTYEGPHGQDHWPASYPECGNNAQSPIDIQTDSVTFDPDLPALQPHGYDQPGTEPLDLHNNGHTVQLSLPST-----LYLGGLPRKYVAAQLHLHWGQKGSPGGSEHQINSEATFAELHIVHYDSDSYDSLSEAAERPQGLAVLGILIEVGETKNIAYEHILSHLHEVRHKDQKTSVPPFNLRELLPKQLGQYFRYNGSLTTPPCYQSVLWTVFYRRSQISMEQLEKLQGTLFSTEEEPSKLLVQNYRALQPLNQRMVFASFIQAGSSYTTGEMLSLGVGILVGCLCLLLAVYFIARKIRKKRLENRKSVVFTSAQATTEA |
| 4BCW Chain:A ((1-256)) | --------------------HWGYGKHNGPEHWHKDFPIAKGERQSPVDIDTHTAKYDPSLKPLSV-SYDQATS--LRILNNGHSFQVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQG-SEHTVDKKKYAAELHLVHWNT-KYGDFGKAVQQPDGLAVLGIFLKVGSAKP-GLQKVVDVLDSIKTKGKSADFTNFDPRGLLPESL-DYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVDNWRPAQPLKNRQIKASF----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BCW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113627 for 2046 contacts (-55.5/contact) +
2D Compatibility (PS) -27076 + (NN) -16445 + (LL) 7180
1D Compatibility (HY) -20800 + (ID) 4850
Total energy: -175618.0 ( -85.83 by residue)
QMean score : 0.310
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