Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKATYKERAATHPSPVAAKLFNIMHEKQTNLCASLDVRTTKELLELVEALGPKICLLKTHVDILTDFSMEGTVKPLKALSAKYNFLLFEDRKFADIGNTVKLQYSAGVYRIAEWADITNAHGVVGPGIVSGLKQAAEEVTKEPRGLLMLAELSCKGSLATGEYTKGTVDIAKSDKDFVIGFIAQRDMGGRDEGYDWLIMTPGVGLDDKGDALGQQYRTVDDVVST-GSDIIIVGRGLFAKGRDAKVEGERYRKAGWEAYLRRCGQQN
2QCH Chain:A ((18-258))---------------PVASKLLRLMQKKETNLCLSADVSLARELLQLADALGPSICMLKTHVDILNDFTLD-VMKELITLAKCHEFLIFEDRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLH---RGCLLIAEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGSRVSMKPE---FLHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISAA-DRLEAAEMYRKAAWEAYLSRL----


General information:
TITO was launched using:
RESULT:

Template: 2QCH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163076 for 2061 contacts (-79.1/contact) +
2D Compatibility (PS) -25219 + (NN) -3368 + (LL) 804
1D Compatibility (HY) -27200 + (ID) 6400
Total energy: -224459.0 ( -108.91 by residue)
QMean score : 0.625

(partial model without unconserved sides chains):
PDB file : Tito_2QCH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QCH-query.scw
PDB file : Tito_Scwrl_2QCH.pdb: