Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVEIETISPGDGRTFPKKGQTCVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNLE
1D7J Chain:A ((1-107))
-GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKLE
General information:
TITO was launched using:
RESULT:
Template:
1D7J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47360 for 800 contacts (-59.2/contact) +
2D Compatibility (PS) -11929 + (NN) -5495 + (LL) 208
1D Compatibility (HY) -12800 + (ID) 4450
Total energy: -81826.0 ( -102.28 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_1D7J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D7J-query.scw
PDB file :
Tito_Scwrl_1D7J.pdb
: