Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATVEPETTPTPNPPPAEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV
1IPC Chain:A ((27-217))
--------------------------EVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTAT-----TKNRFVV
General information:
TITO was launched using:
RESULT:
Template:
1IPC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82652 for 1370 contacts (-60.3/contact) +
2D Compatibility (PS) -19561 + (NN) -9228 + (LL) 616
1D Compatibility (HY) -26800 + (ID) 9250
Total energy: -146875.0 ( -107.21 by residue)
QMean score : 0.716
(partial model without unconserved sides chains):
PDB file :
Tito_1IPC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IPC-query.scw
PDB file :
Tito_Scwrl_1IPC.pdb
: