Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAHAGRTGYDNREIVMKYIHYKLSQRGYEWDAGDVGAAPPGAAPAPGIFSSQPGHTPHPAASRDPVARTSPLQTPAAPGAAAGPALSPVP-PVVHLTLRQAGDDFSRRYRRDFAEMSSQLHLTPFTARGRFATVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLHTWIQDNGGWDAFVELYGPSMRPLFDFSWLSLKTLLSLALVGACITLGAYLGHK |
| 4HNJ Chain:A ((8-199)) | ----------NRELVVDFLSYKLSQKGYSW----------------------------------------------------------IPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDTFVELYG------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HNJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57868 for 746 contacts (-77.6/contact) +
2D Compatibility (PS) -14152 + (NN) -2466 + (LL) 3468
1D Compatibility (HY) -18000 + (ID) 4350
Total energy: -93368.0 ( -125.16 by residue)
QMean score : 0.182
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