Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLPTAQEVQGLMARYIELVDVGDIEAIVQMYADDATVEDPFGQPPIHGREQIAAFYRQGLGGGKVRACLTGPVRASHNGCGAMPFRVEMVWNGQPCALDVIDVMRFDEHGRIQTMQAYWSEVNLSVREPQ
1OHO Chain:A ((2-127))
-NLPTAQEVQGLMARFIELVDVGDIEAIVQMYADDATVENPFGQPPIHGREQIAAFYRQGL---KVRACLTGPVRASHNGCGAMPFRVEMVWNGQPCALDVIDVMRFDEHGRIQTMQAYWSEVNLSV----
General information:
TITO was launched using:
RESULT:
Template:
1OHO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78337 for 885 contacts (-88.5/contact) +
2D Compatibility (PS) -13684 + (NN) -4510 + (LL) -124
1D Compatibility (HY) -18400 + (ID) 6050
Total energy: -121105.0 ( -136.84 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_1OHO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OHO-query.scw
PDB file :
Tito_Scwrl_1OHO.pdb
: