Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALEQNQSTDYYYEENEMNGTYDYSQYELICIKEDVREFAKVFLPVFLTIVFVIGLAGNSMVVAIYAYYKKQRTKTDVYILNLAVADLLLLFTLPFWAVN-AVHGWVLGKIMCKITSALYTLNFVSGMQFLACISIDRYVAVT--------KVPSQSGVGKPCWIICFCVWMAAILLSIPQLVFYTV--NDNA-RCIPIFPR---YLGTSMKALIQMLEICI---GFVVPFLIMGVCYFITARTLM--------KMPNIKISRPLKVLLTVVIVFIVTQLPYNIVKFCRAIDIIYSLITSCNMSKRMDIAIQVTESIALFHSCLNPILYVFMGASFKNYVMKVAKKYGSWRRQRQSVEEFPFDSEGPTEPTSTFSI |
| 4N6H Chain:A ((133-411)) | ------------------------------------------------SAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAK------LINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYWDTVTK-------ICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFV------IVWTLVDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227639 for 1902 contacts (-119.7/contact) +
2D Compatibility (PS) -25795 + (NN) -2857 + (LL) 6692
1D Compatibility (HY) -25200 + (ID) 4150
Total energy: -278949.0 ( -146.66 by residue)
QMean score : 0.249
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