Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGNRSTADADGLLAGRGPAAGASAGASAGLAGQGAAALVGGVLLIGAVLAGNSLVCVSVATERALQTPTNSFIVSLAAADLLLALLVLPLFVYSEVQGGAWLLSPRLCDALMAMDVMLCTASIFNLCAISVDRFVAVAVPLRYNRQGGSRRQLLLIGATWLLSAAVAAPVLCGLNDVRGRDPA------VCRLEDRDYVVYSSVCSFFLPCPLMLLLYWATFRGLQRWEVARRAKLHGRAPRRPSGPGPPSPTPPAPRLPQDPCGPDCAPPAPGLPRGPCGPDCAPAAPGLPPDPCGPDCAPPAPGLPQDPCGPDCAPPAPGLPRGPCGPDCAPPAPGLPQDPCGPDCAPPAPGLPPDPCGSNCAPPDAVRAAALPPQTPPQTRRRRRAKITG-------RERKAMRVLPVVVGAFLLCWTPFFVVHITQALCPACSVPPRLVSAVTWLGYVNSALNPVIYTVFNAEFRNVFRKALRACC |
4U15 Chain:A ((16-398)) | -----------------------------------AFLTGFLALVTII--GNILVIVAFKVNKQLKTVNNYFLLSLACADLIIGVISMNLFT-TYIIMNRWALGNLACDLWLSIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIGLAWVISFVLWAPAILFWQYFVGKRTVPPGECFIQFLSEPTITFGTAIAAFYMPVTIMTILY---------WRIYKETEKMNIFEMLRIDEGGGSGGDEAEKL----FNQDVDAAVRGILRNA----------KLKPVYDSLDAVRRA------------ALINMVFQMGETGVAGFTNSLRMLQQK------------RWDEAAVNLAK------SRWYNQTPNRAKRVITTFRTGTWDAYLIKEKKAAQTLSAILLAFIITWTPYNIMVLVNTFCDSC-IPKTYWNLGYWLCYINSTVNPVCYALCNKTFRTTFKTL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U15.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169761 for 2803 contacts (-60.6/contact) +
2D Compatibility (PS) -37080 + (NN) 9585 + (LL) 1364
1D Compatibility (HY) -31200 + (ID) 5050
Total energy: -232142.0 ( -82.82 by residue)
QMean score : 0.249
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