Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTALSSENCSFQYQLRQTNQPLDVNYLLFLIILGKILLNILTLGMRRK-NTCQNFMEYFCISLAFVDLLLLV-NISIILYFRDFVLLSIRFTKYHICLFT---QIISFTYGFLHYPVFLTACIDYCLNFSKTTKLSFKCQKLFYFFTVILIWISVLAYVLGDPAIYQSLKAQNAYSRHCPFYVSIQ-SYW--LSFFMVMILFVAFITCWEEVTTLVQAIRITSYMNETILYFPFSSHSSYTVRSKKIFLSKLIVCFLSTWLPFVLLQVIIVLLKVQIPAYIEMNIPWLYFVNSFLIATVYWFNCHKLNLKDIGLPLDPFVNWKCCFIPLTIPNLEQIEKPISIMIC |
| 3RZE Chain:A ((11-203)) | -----------------------LVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNIL-YLL-MSKWSL-GRPLCLFWLSMDYVASTASIFSV---FILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIP-I-L-GWNH---RREDKCETDFYDVTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RZE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157951 for 1102 contacts (-143.3/contact) +
2D Compatibility (PS) -17624 + (NN) -2626 + (LL) 2392
1D Compatibility (HY) -12800 + (ID) 1250
Total energy: -189859.0 ( -172.29 by residue)
QMean score : 0.270
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