Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAPTEPWSPSPGSAPWDYSGLDGLEELELCPAGDLPYGYVYIPALYLAAFAVGLLGNAFVVWLLAGRRGPRRLVDTFVLHLAAADLGFVLTLPLWAAAAALGGRWPFGDGLCKLSSFALAGTRCAGALLLAGMSVDRYLAVVKLLEARPLRTP-RCALASCCGVWAVALLAGLPSLVYRGLQPLPGGQDSQCG-EEPSHAFQGLSLL-LLLLTFVLPLVVTLFCYCRISRRLRR-PPHVGRARRNSLRIIFAIESTFVGSWLPFSALRAVFHLARLGALPLPCPLLLALRWGLTIATCLAFVNSCANPLIYLLLDRSFRARALDGACGRTGRLARRISSASSLSRDDSSVFRCRAQAANTASASW |
4RWA Chain:A ((123-399)) | ---------------------------------------IAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLP-FQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINIC-IWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLL----GSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRD---PLVVA---ALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204340 for 1993 contacts (-102.5/contact) +
2D Compatibility (PS) -27798 + (NN) -17070 + (LL) 3808
1D Compatibility (HY) -23600 + (ID) 4050
Total energy: -273050.0 ( -137.00 by residue)
QMean score : 0.300
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