Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNECHYDKHMDFFYNRSNTDTVDDWTGTKLVIVLCVGTFFCLFIFFSNSLVIAAVIKNRKFHFPFYYLLANLAAADFFAGIAYVFLMFNTGPV-SKTLTV-NRWFLRQGLLDS-SLTASLTNLLVIAVERHMSIMR-MRVHSNLTKKRVTLLILLVWAIAIFMGAVP-TLGW---------NCLCNISACSSLAPIYSRSYLVFWT-VSNLMAFLIMVVVYLRIYVYVKRKTNVLSPHTSGSISRRRTPMKLMKTVMTVLGAFVVCWTPGLVVLLLDGLNCRQCGVQHVKRWFLL--LALLNSVVNPIIYSYKDEDMYGTMKKMICCFSQENPERRPSRIPSTVLSRSDTGSQYIEDSISQGAVCNKSTS |
| 4LDE Chain:A ((188-462)) | -----------------------------------VMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVV--PFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFT---NQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQ---KFA-------LKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVI---QDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4LDE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -216721 for 1853 contacts (-117.0/contact) +
2D Compatibility (PS) -26057 + (NN) -13817 + (LL) 4808
1D Compatibility (HY) -29200 + (ID) 3950
Total energy: -284937.0 ( -153.77 by residue)
QMean score : 0.321
|
|
|